[Biopython-dev] [Bug 1943] New: Bad Documentation in Bio.Fasta

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1943

           Summary: Bad Documentation in Bio.Fasta
           Product: Biopython
           Version: Not Applicable
          Platform: All
        OS/Version: All
            Status: NEW
          Severity: minor
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: mcolosimo at mitre.org


This has been getting me every year I think. I implicatively state what these
objects really are.

Second, fixed the order in the Documentation for title2id to match the actual
code.

Diff below

Index: __init__.py
===================================================================
RCS file: /home/repository/biopython/biopython/Bio/Fasta/__init__.py,v
retrieving revision 1.13
diff -r1.13 __init__.py
9,10c9,10
< RecordParser       Parses FASTA sequence data into a Record object.
< SequenceParser     Parses FASTA sequence data into a Sequence object.
---
> RecordParser       Parses FASTA sequence data into a Fasta.Record object.
> SequenceParser     Parses FASTA sequence data into a SeqRecord object.
109c109
<     """Parses FASTA sequence data into a Record object.
---
>     """Parses FASTA sequence data into a Fasta.Record object.
126c126
<     """Parses FASTA sequence data into a Sequence object.
---
>     """Parses FASTA sequence data into a SeqRecord object.
136c136
<         file (without the beginning >), will return the name, id and
---
>         file (without the beginning >), will return the id, name,  and




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