[Biopython-dev] Re: An interface to the maximum-likelihood programs of PHYLIP

[rjw500 at cs.york.ac.uk]

Dear Peter,

I thought I should explain an important point that I failed to emphasise
in the user manual on the interface. The methods that invoke the PHYLIP
programs (dnaml etc) should not be called from the interactive prompt. The
reason is that the information written to the phylip.results file about
the command used to invoke the program is obtained from the stack.

I hope has not caused any problems.

All the best,

Robert Wilson