[Biopython-dev] [Bug 1851] New: implicitly converted pointer

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sun Sep 4 15:11:39 EDT 2005


           Summary: implicitly converted pointer
           Product: Biopython
           Version: Not Applicable
          Platform: Other
               URL: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=326403
        OS/Version: Linux
            Status: NEW
          Severity: minor
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: mail at philipp-benner.de

Begin forwarded message:

Date: Fri, 02 Sep 2005 15:51:43 -0600
From: dann frazier <dannf at hp.com>
To: submit at bugs.debian.org
Cc: David Mosberger <David.Mosberger at acm.org>
Subject: Bug#326403: python-biopython: implicitly converted pointer

Package: python-biopython
Version: 1.40b-1
Severity: important
Tags: patch

Our automated buildd log filter[1] detected a problem[2] that will cause
your package to segfault on architectures where the size of a pointer is
greater than the size of an integer, such as ia64.

[2]Function `mmcif_get_string' implicitly converted to pointer at

--- python-biopython-1.40b/Bio/PDB/mmCIF/MMCIFlexmodule.c~	2003-10-10
05:23:38.000000000 -0600
+++ python-biopython-1.40b/Bio/PDB/mmCIF/MMCIFlexmodule.c	2005-09-02
15:47:44.000000000 -0600
@@ -1,5 +1,7 @@
 #include <Python.h>
+char *mmcif_get_string(void);
 FILE *fp;
 static PyObject *MMCIFlex_open_file(PyObject *self, PyObject *args)

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