[Biopython-dev] [Bug 1680] Problems with the GenBank indexing

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Mon Dec 20 17:51:33 EST 2004


------- Additional Comments From jchang at biopython.org  2004-12-20 17:51 -------
This is because the Martel/Mindy iterator does not recognize spaces between the records in the file.  If 
you remove the spaces from the file, the code will index the file without complaint.

Where did you get this record?  Did you get it directly from NCBI, or did you create or edit it yourself?  
One fix might be to modify the system to ignore whitespaces between records.  But that may cause 
problems if the system were applied to a format where the number of blank lines were important.

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