[Biopython-dev] [Bug 1715] Bio.Blast.NCBIStandalone does not support standalone NCBI RPS-Blast (rpsblast) output

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Dec 8 16:03:33 EST 2004


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
 Attachment #186 is|0                           |1
           obsolete|                            |

------- Additional Comments From biopython-bugzilla at maubp.freeserve.co.uk  2004-12-08 16:03 -------
Created an attachment (id=187)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=187&action=view)
Edited version of NCBIStandalone.py based on CVS revision 1.57

As per attachment 186 except for a one word change:

database name in the header was being dealt with as a "noevent" instead of a
"database_info" event.

Sorry for not spotting this last time round, I have been running
test_NCBIStandalone.py on its own and doing file comparison on the output by
hand.  I couldn't workout how to use the GUI run_test.py to do this for me.

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