[Biopython-dev] [Bug 1715] Bio.Blast.NCBIStandalone does not support standalone NCBI RPS-Blast (rpsblast) output

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=1715

biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
 Attachment #186 is|0                           |1
           obsolete|                            |



------- Additional Comments From biopython-bugzilla at maubp.freeserve.co.uk  2004-12-08 16:03 -------
Created an attachment (id=187)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=187&action=view)
Edited version of NCBIStandalone.py based on CVS revision 1.57

As per attachment 186 except for a one word change:

database name in the header was being dealt with as a "noevent" instead of a
"database_info" event.

Sorry for not spotting this last time round, I have been running
test_NCBIStandalone.py on its own and doing file comparison on the output by
hand.  I couldn't workout how to use the GUI run_test.py to do this for me.



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