[Biopython-dev] Notification: incoming/93

Jeffrey Chang jchang at smi.stanford.edu
Wed Nov 13 18:09:45 EST 2002


Thanks!  I've applied the patch.

Jeff


On Thu, Nov 07, 2002 at 09:52:55AM -0500, biopython-bugs at bioperl.org wrote:
> JitterBug notification
> 
> new message incoming/93
> 
> Message summary for PR#93
> 	From: andreas.kuntzagk at mdc-berlin.de
> 	Subject: GenBank-Format (Feature-Qualifier /motif)
> 	Date: Thu, 7 Nov 2002 09:52:51 -0500
> 	0 replies 	0 followups
> 
> ====> ORIGINAL MESSAGE FOLLOWS <====
> 
> >From andreas.kuntzagk at mdc-berlin.de Thu Nov  7 09:52:52 2002
> Received: from localhost (localhost [127.0.0.1])
> 	by pw600a.bioperl.org (8.12.2/8.12.2) with ESMTP id gA7Eqp6J025565
> 	for <biopython-bugs at pw600a.bioperl.org>; Thu, 7 Nov 2002 09:52:52 -0500
> Date: Thu, 7 Nov 2002 09:52:51 -0500
> Message-Id: <200211071452.gA7Eqp6J025565 at pw600a.bioperl.org>
> From: andreas.kuntzagk at mdc-berlin.de
> To: biopython-bugs at bioperl.org
> Subject: GenBank-Format (Feature-Qualifier /motif)
> 
> Full_Name: Andreas Kuntzagk
> Module: genbank_format.py
> Version: 
> OS: 
> Submission from: sulawesi.bioinf.mdc-berlin.de (141.80.80.60)
> 
> 
> In Entry GI:4165449 (and others) there is a qualifier /motif in a CDS -Feature.
> Currently the genbank_format.py doesn't allow this.
> 
> Fix:
>     insert "motif" into the feature_qualifier_names
> 
> diff -r1.20 genbank_format.py
> 528a529
> >     "motif",
> 
> 
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