[Biopython-dev] Failed Tests

[Gavin Crooks]

Test_KDTree is still skipped, and test_ndb now runs, but fails..

FAIL: test_ndb
----------------------------------------------------------------------
Traceback (most recent call last):
  File "run_tests.py", line 131, in runTest
    self.runSafeTest()
  File "run_tests.py", line 168, in runSafeTest
    expected_handle)
  File "run_tests.py", line 268, in compare_output
    assert expected_line == output_line, \
AssertionError:
Output  : 'Sequence: F : g c g a t a t a c g u\n'
Expected: 'Sequence: A : g c g a t a t a c g u\n'
----------------------------------------------------------------------
Ran 60 tests in 164.546s
                         

> >
> > test_Crystal ... Skipping test because of import error: No module
named
> > Hetero
> > ok
> 
>   I migrated Hetro to the __init__ file.  I need to check in the
change.
> The dangling reference worked on my system because I didn't delete the
old
> Hetero.
> 
> > test_KDTree ... Skipping test because of import error: No module
named
> > _KDTreecok
> > test_cdd ... Skipping test because of import error: cannot import
name
> > remove_leading_whitespace
> Seems I added this since the last commit
> > test_ndb ... Skipping test because of import error: cannot import
name
> > Hetero
> Same as Hetero
> >
> Let me know how it goes when I check the changes in.
> 
>                                               Cayte
> 
> 
>