[Biopython-dev] Last chance to clam PIR parser

Cayte katel at worldpath.net
Sat Oct 27 00:19:15 EDT 2001


----- Original Message ----- 
From: "Andrew Dalke" <adalke at mindspring.com>
To: <biopython-dev at biopython.org>
Sent: Friday, October 26, 2001 12:27 AM
Subject: Re: [Biopython-dev] Last chance to clam PIR parser


> The last Martel release I see was version 0.5
>   http://www.biopython.org/~dalke/Martel-0.5.tar.gz
> and the PIR format definition for Martel is at
>   http://www.biopython.org/~dalke/Martel-0.5/formats/PIR_3_0.py
> 
   What formats can I work on without a collision? GCG/MSF?

  The PIR format described in 
www.sander.embl-ebi.ac.uk/Services/webin/help/webin-align/align_format_help.html#pir

seems different and more fastalike than the way you describe PIR.  Are there different renditions of pir?


                       Cayte
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