[Biopython-dev] Failed tests.

Tarjei Mikkelsen tarjei_mikkelsen at hotmail.com
Tue Nov 6 14:51:35 EST 2001


The KEGG and Pathway errors are probably caused by the setup script failing 
to install them. I've commited a quick fix for that. Alternatively, you can 
just copy the Bio/Pathway and Bio/KEGG directories to 
/lib/pythonX/site-packages/Bio directory.


- Tarjei

>=====================================================================
>ERROR: test_KEGG
>----------------------------------------------------------------------
>Traceback (most recent call last):
>   File "./run_tests.py", line 136, in runTest
>     __import__(self.test_name)
>   File "./test_KEGG.py", line 8, in ?
>     from Bio.KEGG import Map
>ImportError: cannot import name Map
>======================================================================
>ERROR: test_Pathway
>----------------------------------------------------------------------
>Traceback (most recent call last):
>   File "./run_tests.py", line 136, in runTest
>     __import__(self.test_name)
>   File "./test_Pathway.py", line 10, in ?
>     from Bio.Pathway import *
>ImportError: No module named Pathway
>======================================================================


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