katel at worldpath.net
Sat Dec 1 22:39:02 EST 2001
The sig in Generic.Alignment function, add_sequence,
def add_sequence(self, descriptor, sequence, start = None, end = None,
weight = 1.0):
does not allow the caller to pass in the name of the sequence. I think the
descriptor should have a default of the empty string and the name should be
part of the signature.
I need the Alignment class for the SAF parser, because the SAF format
represents alignments rather than isolated sequences.
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