[Biopython-dev] Notification: incoming/12

biopython-bug-admin at bioperl.org biopython-bug-admin at bioperl.org
Mon Aug 7 15:50:25 EDT 2000

JitterBug notification

jchang changed notes

Message summary for PR#12
	From: thomas at cbs.dtu.dk
	Subject: blastn
	Date: Sat, 5 Aug 2000 05:05:11 -0400
	0 replies 	0 followups
	Notes: [jchang]
Yep, the parser's definitely broken.  In the alignment
header, the scanner was checking for a line containing 
'          '.  However, in the latest version of BLAST
it seems to have been changed to a real blank line.  I've
changed the scanner (NCBIStandalone.py, revision 1.22)
to accept either one.  In addition, I've added a BLASTN
2.0.14 test file into the regression tests as bt062.


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