[Bioperl-microarray] microarray data IO
Ming Chen
mchen at techfak.uni-bielefeld.de
Wed Mar 24 13:04:56 EST 2004
Dear Allen,
I tried to use the MicroarrayIO module, but failed. could you please
help me? it runs on win2k, apache, activeperl, bioperl-1.2.3. the error
message is:
Bio/Expression/MicroarrayIO/affymetrix.pm: couldn't load affymetrix -
for more details on supported formats please see the MicroarrayIO docs.
Can't call method "next_array" on an undefined value at microarray.cgi
line 12
the code is below:
#!c:/perl/bin/perl
use Bio::Expression::MicroarrayIO;
my $stream = Bio::Expression::MicroarrayIO->new(
'-file' => "133a.cel",
'-template' => "133a.cdf",
'-format' => "affymetrix",
);
while ( my $in = $stream->next_array() ) {
print $in->id() . "\n";
}
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