From cjfields1 at gmail.com Mon Dec 2 16:11:22 2019 From: cjfields1 at gmail.com (Christopher Fields) Date: Mon, 2 Dec 2019 16:11:22 +0000 Subject: [Bioperl-l] Fate of Bio::Perl newbie module? In-Reply-To: References: <20191127105236.hxwdnqhq732v62w6@an3as.eu> <20191127152437.6y4pmp5ecmxpesvj@an3as.eu> <20191130063202.GR1945@an3as.eu> Message-ID: Not a problem Michael. I also pushed a new Bio::DB::NCBIHelper, which updated a few missing dependencies. chris From: Michael Crusoe Date: Monday, December 2, 2019 at 10:05 AM To: Andreas Tille Cc: Chris Fields , Carn? Draug , Debian Med Project List , bioperl mailing list Subject: Re: [Bioperl-l] Fate of Bio::Perl newbie module? On Sat, Nov 30, 2019 at 7:32 AM Andreas Tille > wrote: Hi Christopher, On Fri, Nov 29, 2019 at 09:11:41PM +0000, Fields, Christopher J wrote: > Just a quick update: I have pushed a quick release of Bio::DB::SwissProt, Bio::DB::RefSeq, and Bio::Procedural (which contains Bio::Perl) to CPAN. I'm awaiting CPAN testing for the Bio::Procedural module (this will show up here: http://matrix.cpantesters.org/?dist=Bio-Procedural); the others seem to be passing. Thanks for the update. I need to admit I personally can not match these modules to the old bioperl package and what might be missing in the new what is needed for reverse dependencies. I've consulted codesearch.debian.net. I have not found any reference to Bio::Procedural. Hey Andreas, The Bio-Procedural distribution includes the "Bio::Perl" module: https://metacpan.org/pod/Bio::Perl Looks like all the new distributions are live on CPAN, thanks Chris! https://metacpan.org/author/CJFIELDS?sort=[[3,1]] -- Michael R. Crusoe -------------- next part -------------- An HTML attachment was scrubbed... URL: