[Bioperl-l] UIDs for utils retrieval

Fields, Christopher J cjfields at illinois.edu
Fri May 5 21:18:13 UTC 2017


Accession.version should ‘just work’ as a replacement (this worked in the past with plain accessions, but you would sometimes get wonky results).  I think original GIs will continue to work but will be missing in the output.

chris

On 5/5/17, 4:04 PM, "Bioperl-l on behalf of Warren Gallin" <bioperl-l-bounces+cjfields=illinois.edu at mailman.open-bio.org on behalf of wgallin at ualberta.ca> wrote:

    A quick, and perhaps simple question.
    
    With the removal of gi numbers from NCBI records, what numbers does one use as a a unique identifier in the -id flag to retrieve individual sequences?
    
    Warren Gallin
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