[Bioperl-l] free software to estimate dS and dN in pairwise comparisons

[Fields, Christopher J]

On 1/11/17, 8:44 AM, "Bioperl-l on behalf of Carnë Draug" <bioperl-l-bounces+cjfields=illinois.edu at mailman.open-bio.org on behalf of carandraug+dev at gmail.com> wrote:



>On 11 January 2017 at 04:45, Mark A. Jensen <maj at fortinbras.us> wrote:
>> And here it is -- still runs! No BioPerl required, as it turns out.
>>
>> https://github.com/majensen/dnds
>>
>> MAJ
>
>This is great thank you.  Since you are not packaging it, can I just
>copy it into my project?  Or maybe adapt it to bioperl (any suggestion
>where it should go?)  Also, can you please specify a license?
>
>Thank you
>Carnë

This might be something to ask Jason (cc’d).  Jason, any ideas where dN/dS functionality might fit best in bioperl?

chris
>