[Bioperl-l] Converting pdb files to dssp file

Brian Osborne briano at bioteam.net
Mon Sep 1 14:17:43 UTC 2014


Bio::Structure::IO::pdb reads and writes PDB format, but Bio::Structure::SecStr::DSSP::Res only reads *dssp files.

I don’t think this conversion is possible with BioPerl.

Brian O.

On Aug 30, 2014, at 11:08 PM, vandana Baranwal <lovevandu08 at gmail.com> wrote:

> Hello
> Is is possible to convert a pdb file int dssp file using bioperl. I searched a lot but didn't get a fruitful answer.
> I want to convert approximately 1000 pdb files into dssp files.
> Any help will be highly appreciated
> -- 
> Thanks & Regards
> Vandana Kumari
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at mailman.open-bio.org
> http://mailman.open-bio.org/mailman/listinfo/bioperl-l

More information about the Bioperl-l mailing list