[Bioperl-l] New Perl ORM for graph db Neo4j

Hilmar Lapp hlapp at drycafe.net
Mon Sep 17 17:44:14 UTC 2012


Yes, indeed. And lo and behold, the Open Tree of Life (http://opentreeoflife.org) folks are at present building their tree store on top of Neo4J. They're mostly Python, though. (Which I'm sure our Biopython colleagues will love to hear.)

	-hilmar
 
On Sep 17, 2012, at 11:28 AM, Fields, Christopher J wrote:

> Following up on this, any specific modules where this would be a boon?  I could see this being very useful for Bio::Tree (and Jason's recent work on creating a persistent backend for storing tree info). Bio::Ontology also…
> 
> chris
> 
> On Sep 17, 2012, at 12:08 PM, "Fields, Christopher J" <cjfields at illinois.edu> wrote:
> 
>> Agree, very nice!  
>> 
>> chris
>> 
>> On Sep 17, 2012, at 10:00 AM, Hilmar Lapp <hlapp at drycafe.net> wrote:
>> 
>>> Very nice, Mark! -hilmar
>>> 
>>> On Sep 17, 2012, at 8:13 AM, Mark A. Jensen wrote:
>>> 
>>>> Hello all, 
>>>> If anyone is experimenting with Neo4j (www.neo4j.org) and needs a full-featured Perl OO interface, please give REST::Neo4p (https://metacpan.org/module/REST::Neo4p) a try. Send me the bugs via RT!
>>>> cheers, 
>>>> MAJ
>>>> 
>>>> 
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: Hilmar Lapp -:- Durham, NC -:- hlapp at drycafe dot net :
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