[Bioperl-l] update: genpept module

Chris Fields cjfields at illinois.edu
Thu Nov 25 03:24:40 UTC 2010


Dimitar,

Missed your original post, but was it reported as a bug?  

chris

On Nov 24, 2010, at 8:38 PM, Dimitar Kenanov wrote:

> Hi guys,
> just managed to get GenPept to give me the fasta in the full form. I modified GenPept in this way:
> 
> sub new {
>  my($class, @args) = @_;
>  my $self = $class->SUPER::new(@args);
>  my ($verbose,$format)=$self->_rearrange([qw(VERBOSE FORMAT)], at args); #DIMITAR
>  $DEFAULTFORMAT='fasta' if (defined $format); #DIMITAR
>  $self->request_format($self->default_format($format));
>  return $self;
> }
> 
> Cheers
> Dimitar
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