[Bioperl-l] question about Bio::Tools::Run::RemoteBlast

Chris Fields cjfields at illinois.edu
Wed Nov 10 03:46:00 UTC 2010


Only if the output appends to that file (I don't recall personally, so it's worth a try).

chris

On Nov 9, 2010, at 6:54 PM, Florent Angly wrote:

> Wouldn't using a single filename be the way to go?
>> my $filename = "blast_ressults.out";
>>           $factory->save_output($filename);
> Florent
> 
> 
> On 09/11/10 19:05, njauxiongjie wrote:
>> Hi,
>> 
>> I have used the scripts list in section of "SYNOPSIS" in th webpage http://search.cpan.org/~cjfields/BioPerl-1.6.1/Bio/Tools/Run/RemoteBlast.pm.
>> 
>> there are two line of the code like below:
>> my $filename = $result->query_name()."\.out";
>>           $factory->save_output($filename);
>> this saved the blast result in separated files by the query name.
>> 
>> my question is: how can i save the blast results of all querys in one file?
>> 
>> 
>> 
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