[Bioperl-l] SFF format support

Miguel Pignatelli pignatelli_mig at gva.es
Thu Nov 4 11:49:07 UTC 2010

Thanks Peter, I have already took a look at the module. It will 
certainly help a lot. I also have some real SFF files from different 
collaborations that I can use for testing.

Let's roll up the sleeves...


Peter wrote:
> 2010/11/4 Miguel Pignatelli <miguel.pignatelli at uv.es>:
>> Thanks Chris,
>> I will get in touch again when I am able to hook a working module (I will
>> check Biopython's Bio.Seq.SffIO)
>> M;
> Hi Miguel,
> In case it helps, the Biopython SFF code is here - this includes embedded
> documentation with test examples:
> http://github.com/biopython/biopython/blob/master/Bio/SeqIO/SffIO.py
> We also have some test SFF files here (see the README file for details):
> http://github.com/biopython/biopython/tree/master/Tests/Roche/
> Peter

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