[Bioperl-l] Bioperl-l Digest, Vol 85, Issue 34

Dan Kortschak dan.kortschak at adelaide.edu.au
Tue May 25 06:12:27 UTC 2010


Dimitar,

Try having a look through the EUtilities cookbook:

http://www.bioperl.org/wiki/HOWTO:EUtilities_Cookbook

cheers
Dan

On Tue, 2010-05-25 at 01:58 -0400, Dimitar Kenanov wrote:
> Date: Tue, 25 May 2010 10:28:19 +0800
> From: Dimitar Kenanov <dimitark at bii.a-star.edu.sg>
> Subject: [Bioperl-l] about gene names
> To: "'bioperl-l at bioperl.org'" <bioperl-l at bioperl.org>
> Message-ID: <4BFB35C3.4010808 at bii.a-star.edu.sg>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
> 
> Hi guys,
> i have a question How can I get only the gene names from NCBI Gene
> when 
> i have the sequence id? For example with this id - NP_005264.2 i can 
> search NCBI Gene online but i want to get only the gene name 
> automatically. I was checking the Bio::DB::EntrezGene module but it 
> didnt became clear to me if i can use it for my purposes.
> 
> Thank you in advance.
> 
> Greetings
> Dimitar
> 




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