[Bioperl-l] branch pruning v.2
Robert Buels
rmb32 at cornell.edu
Tue May 18 00:15:13 UTC 2010
OK, implemented as proposed. How-to for resurrecting archived branches
is on the wiki at http://www.bioperl.org/wiki/Using_Git#Archived_Branches
Rob
Chris Fields wrote:
> On May 14, 2010, at 6:01 PM, Robert Buels wrote:
>
>> Chris Fields wrote:
>>> On a related note, going through, it appears the git conversion didn't track merges back to trunk. For instance, I know the featann_rollback was merged to trunk but it's not showing up. I know svn had poor merge-tracking prior to 1.5 (where svn:mergeinfo came into play), so it may be hard to actually find true merges w/o that.
>> OK, here are all our current branches, I will go through them in order of last-modified date.
>>
>> 1998-12-11 bioperl
>> 1999-02-19 release-0-04-bug
>> 1999-04-13 bioperl-live
>> 1999-04-13 stable-0-05
>> 2000-01-27 branch-ensembl-m1
>> 2000-02-07 internal-branch-pre-delete-06-tag
>> 2000-03-22 stable-0-05-new
>> 2001-02-19 branch-06
>> 2001-11-14 branch-07-ensembl-120
>> 2001-12-28 steve_chervitz
>> 2002-01-16 branch-07
>> 2002-10-22 branch-1-0-0
>> 2003-07-07 branch-1-2-collection
>> 2003-10-13 branch-1-2
>> 2004-10-20 ontology-cache
>> 2005-04-14 branch-1-4
>> 2006-01-11 bioperl-branch-1-5-1
>> 2006-08-14 branch-experimental
>> 2007-02-14 branch-1-5-2
>> 2007-08-28 featann_rollback
>> 2007-11-07 lightweight_feature_branch
>>
>> Proposal: move the above to refs/archive and not worry any further about them. Maybe we can throw them out in 2020.
>
> Just as long as we know they are there. Rob, can you document the archive set up on the wiki so we don't forget it?
>
> I deleted the featann_rollback branch. That was a feature branch (no pun intended) to rollback overloading and a host of other changes introduced to bioperl just before the 1.5 release. It was merged a few years ago in svn.
>
>> 2009-06-17 restriction-refactor
>>
>> Proposal: delete, looks like it was merged in a2cb40e6c9c7da4f776dbb72a0266f54320fa37f
>
> This may have been Mark's refactoring, so yes, delete.
>
>> 2009-08-13 TRY_gff_refactor
>> proposal: delete, git claims it is merged
>>
>> 2009-08-13 TRY_locatableseq_refactor
>> proposal: delete, git claims it is merged
>
> I deleted these. The primary goal of TRY_gff_refactor was to work in GFF3 work, but that may rely on FeatureIO so will have to be done in stages. At some point, if we do a larger scale refactoring of GFF for GFF3 compat we can make another branch. TRY_locatableseq_refactor will be obsoleted once GSoC starts.
>
>> 2009-09-29 branch-1-6
>> keep, 1.6 maint branch i think.
>
> Yes. I will probably work on another set of merges from to 1.6 soon to bring it up to speed, maybe for one last 1.6 release.
>
>> 2009-10-14 anydbm-branch
>> keep, MAJ working. MAJ, maybe you should move this to topic/ ?
>>
>> 2010-01-31 TRY_featureio_refactor
>> keep, but looks dead. cjfields, maybe you want to delete it?
>
> Yes. I've deleted this, as FeatureIO is on it's own.
>
>> 2010-05-12 topic/bug_3077
>> delete, git claims it is merged.
>
> That's already deleted. Maybe needs to be pruned locally?
>
>> Please review, and I'll do the work if people agree.
>>
>> Rob
>
> Good start!
>
> chris
>
>
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