[Bioperl-l] problem of bioperl on mac
Kevin Brown
Kevin.M.Brown at asu.edu
Wed Mar 4 20:56:44 UTC 2009
And for those that are interested, here's what version of bioperl are
available via fink for various levels of OSX
http://pdb.finkproject.org/pdb/package.php/bioperl-pm586
> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org
> [mailto:bioperl-l-bounces at lists.open-bio.org] On Behalf Of MADSGENE
> Sent: Wednesday, March 04, 2009 1:52 PM
> To: Bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] problem of bioperl on mac
>
>
> Hi bioperlers,
>
> Thanks for all responses.
> I removed the bioperl and reinstalled it by fink. It works.
>
> Regards
>
> Xia
>
>
>
>
>
> MADSGENE wrote:
> >
> >
> > I installed the bioperl-pm586 version 1.5.2-4 in my macbook(MAC OS X
> > version 10.5.6) using fink. I also found it in
> /sw/share/bioperl-pm586.
> > However I failed to get it when I typed "which". When I
> typed >perl -e
> > 'print @INC', it displayed
> > /sw/lib/perl5/5.8.6/darwin-thread-multi-21evel...but no
> information about
> > bioperl-pm586. I took the suggstion and added "setenv PERL5LIB
> > ${PERL5LIB}:/sw/share/bioperl-pm586 " into .bashrc, it
> still did not work.
> >
> > I am grateful to you if anyone could help me out.
> > I note there are two .bashrc files, one is in root and the
> other in home.
> > If your suggestion is to modify these files, please let me
> know which one.
> >
> > Regards
> >
> > Xia Wang
> >
> >
> >
> >
>
> --
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>
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