[Bioperl-l] How to download the exon sequences, and the exon and CDS boundary for a RefSeq ID?

Peng Yu pengyu.ut at gmail.com
Tue Dec 29 22:01:05 UTC 2009


I see the following example. But it is not clear to me how to get the
exon sequences. I also want to get the exon boundaries and associated
CDS boundaries. Although, I can get the boundary information from ucsc
table browser, but it would be convenient if I can get it in bioperl
along with the sequence.

Could somebody let me know how do it?

http://doc.bioperl.org/releases/bioperl-current/bioperl-live/Bio/DB/RefSeq.html



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