[Bioperl-l] undefined sub-sequence with a single base
Mark A. Jensen
maj at fortinbras.us
Sat Nov 29 14:38:06 UTC 2008
## sorry about the multi-post
All-
Thought I would throw this up to this thread. Patch to
http://bugzilla.open-bio.org/show_bug.cgi?id=2476
using mapping-aware subseq() seems to solve the problem. It appears to
translate cleanly between
aas and nts, and gives single-residue subseqs naturally (even at the
boundaries). Comments please...
cheers Mark
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