[Bioperl-l] How to get the entropy of each nucleotide of an aligment?

[Cláudio Sampaio]

Hi all,

I am still a newbie to bioperl, and while searching for a way to calculate
the entropy score of an alignment I came to Matrix scoring -
http://doc.bioperl.org/releases/bioperl-1.4/Bio/Matrix/Scoring.html - but
couldn't figure out how it relate to the Bio::Align class and objects. Can
someone more knowledgeable give me a clue on how to start?

Best regards,

Cláudio "Patola"