[Bioperl-l] loading sequence error bioseq
snoze pa
snoze.pa at gmail.com
Tue Jan 29 18:22:56 UTC 2008
Dear User,
After successfully creating a database bioseqdb and loading ncbi_taxonomy
successfully I am getting following error message while loading sequences
into database.
load_seqdatabase.pl -host localhost -dbname bioseqdb .....etc
MSG: insert in Bio::DB::BioSQL::SeqFeatureAdaptor (driver) failed, values
were ("","31") FKs
MSG: insert in Bio::DB::BioSQL::SeqFeatureAdaptor (driver) failed, values
were
MSG: insert in Bio::DB::BioSQL::SeqAdaptor (driver) failed, values were
Column 'dbname' cannot be null
STACK: /usr/local/bioperl-
db-1.5.2_100/scripts/biosql/load_seqdatabase.pl:620
-----------------------------------------------------------
at /usr/local/bioperl-db-1.5.2_100/scripts/biosql/load_seqdatabase.pl line
633
Any Idea?
Thanks in advance
s
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