[Bioperl-l] bioperl DB error
snoze pa
snoze.pa at gmail.com
Fri Jan 25 23:30:56 UTC 2008
Dear Users,
I am using bioperl/iosql and trying to install ncbi taxonomy. But I am
getting following error message.
any help? thanks in advance
perl load_ncbi_taxonomy.pl -download -driver mysql -dbname bioseqdb -dbuser
root
Loading NCBI taxon database in taxdata:
... retrieving all taxon nodes in the database
... reading in taxon nodes from nodes.dmp
... insert / update / delete taxon nodes
failed to insert node (10090;10090;10088;species;1;2): Duplicate entry
'10090' for key 2 at load_ncbi_taxonomy.pl line 568.
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