[Bioperl-l] module for pubchem queries
Robert Citek
robert.citek at gmail.com
Wed Apr 2 12:24:06 UTC 2008
Hello all,
I have a list of chemical compounds that have some kind of interaction
with proteins or genes. The current list contains names or SMILES and
I would like to get the CID number for those compounds. Currently,
I'm using perl to query the NCBI's eutils[1], which works great. But
I was just curious to know of there was a bioperl module to do
something similar. A quick google didn't turn up anything, so I
thought I'd ask.
[1] http://www.ncbi.nlm.nih.gov/entrez/query/static/eutils_help.html
Regards,
- Robert
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