[Bioperl-l] rpsblast

[Andrew Stewart]

When I run...   $result = $factory->rpsblast($seq);   ... where $seq  
is a Bio::Seq object, it seems to simply copy the $seq object to  
$result;  When I run something similar... $rpsblast('/path/to/ 
myFile');    ... the value of $result then becomes '/path/to/myFile'.

Anyone else encounter this?


--
Andrew Stewart
Research Assistant, Genomics Team
Navy Medical Research Center (NMRC)
Biological Defense Research Directorate (BDRD)
BDRD Annex
12300 Washington Avenue, 2nd Floor
Rockville, MD 20852

email: stewarta at nmrc.navy.mil
phone: 301-231-6700 Ext 270