[Bioperl-l] dealing with large files
Michael Thon
mike.thon at gmail.com
Thu Dec 20 05:59:06 UTC 2007
On Dec 18, 2007, at 7:04 PM, Stefano Ghignone wrote:
> my $in = Bio::SeqIO->new(-file => "/bin/gunzip -c $infile |", -
> format => 'EMBL');
This is just for the sake of curiosity, since you already found a
solution to your problem, but I wonder how perl will handle a file
opened this way. Will it try to suck the whole thing into ram in one
go?
Mike
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