[Bioperl-l] New Bio::Tools::Run::Phylo::SLR - Wrapper around the SLR program

Albert Vilella avilella at gmail.com
Tue Dec 4 11:51:05 UTC 2007


Hi all,

There is a new wrapper in bioperl-run for SLR:

http://www.bioperl.org/wiki/SLR

Right now, output parsing is very simple, and I have only tested it on
my linux machine.
Can someone with a Mac give it a try?

update your bioperl-run to cvs head, then:

# try the installer, SLR is option 6
perl scripts/bioperl_application_installer.PLS
# then try to run the tests (should take about a minute)
perl t/SLR.t

Any comments on the code would be appreciated,

Thanks in advance,

Cheers,

    Albert.



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