[Bioperl-l] GO terms not present in Swiss annotation object
Juan Cristobal Vera
jcv128 at psu.edu
Tue Nov 21 00:52:47 UTC 2006
Hi,
I'm writing a simple application to extract various fields from swissprot objects and I can't access the GO terms found in "dblink" part of the swiss format flat files. I'm not a professional programmer and I can't figure out why this is occuring. All the other "dblink" keys are being generated as far as I can tell (e.g. embl, pfam, etc). The GO terms are just skipped over and it's driving me crazy. Not sure if this is a bug or a deliberate strategy I'm unfamiliar with. I apologize if this is not the correct forum to ask for this sort of help and would ask to be directed to the proper one.
Juan Cristobal Vera
Graduate Student
Department of Biology
Penn State University
208 Mueller Laboratory
University Park, PA 16802
(814)863-2957
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