[Bioperl-l] Bio::SeqIO::fasta patch.
JK (Jesper Agerbo Krogh)
JK at novozymes.com
Fri Nov 10 12:41:19 UTC 2006
Hi.
Just a small patch for outputting stuff on the descriptionline i fasta format.
Stuff like:
DE test
DE test2
DE test3
converted to fasta becomes:
> testtest2test3
and not
> test test2 test3
Index: fasta.pm
===================================================================
RCS file: /home/repository/bioperl/bioperl-live/Bio/SeqIO/fasta.pm,v
retrieving revision 1.60
diff -r1.60 fasta.pm
203c203
< $desc =~ s/\n//g;
---
> $desc =~ s/\n/ /g;
Should probably be applied to the stable-branch .
Jesper
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