[Bioperl-l] BioSQL load_seqdatabase.pl -pipeline option
Seth Johnson
johnson.biotech at gmail.com
Fri Nov 3 16:47:56 UTC 2006
Hello guys,
I'm populating biosql database using "load_seqdatabase.pl" from
genbank release files for primates. However, I only need sequences
that belong to humans (taxon id: 9606). I assume that best way to
filter the necessary sequences is to use '-pipeline' option of the
script. The documentation seems a little vague to me on how to create
my own processor to accomplish the task. Can anyone clarify the
steps???
--
Best Regards,
Seth Johnson
Senior Bioinformatics Associate
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