[Bioperl-l] problems iwth Bio::graphics module

[chen li]

Dear Dr. Stein,

Thank you so much. I follow your suggestions and
download codes from the Bioperl CVS website. Now
everything is working.


Li 


--- Lincoln Stein <lstein at cshl.edu> wrote:

> Hi Chen,
> 
> It looks to me like you cut and paste the data1.txt
> file from the web site, 
> consequently replacing the tabs with spaces. Please
> get table1.txt from the 
> BioPerl distribution, as instructed in the tutorial.
> 
> Best,
> 
> Lincoln
> 
> On Tuesday 23 May 2006 10:06, Lincoln Stein wrote:
> > Hi,
> >
> > It is possible that your version of display can't
> handle PNG images. Try
> > saving the output as a file and then opening it in
> another image program:
> >
> > 	perl render_blast1.pl data1.txt > data1.png
> >
> > Another thing to watch out for is that, depending
> on what version of Perl
> > you're using, you may have to insert this
> statement into the
> > render_blast1.pl script (somewhere near the top):
> >
> > 	binmode STDOUT;
> >
> > Lincoln
> >
> > On Saturday 20 May 2006 20:15, chen li wrote:
> > > Dear all,
> > >
> > >
> > > I try one script from GraphicsHowTo under Cygwin
> > > environment(GD and libpng already installed). I
> type
> > > this line in Cygwin X window:
> > >
> > >
> > > $ perl render_blast1.pl data1.txt | display -
> > >
> > > And here is the result:
> > >
> > > display: no decode delegate for this image
> format
> > > `/tmp/magick-qKiRPDRS'.
> > >
> > > Any idea?
> > >
> > >
> > > Thank you very much,
> > >
> > > Li
> > >
> > >
> > >
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> 
> -- 
> Lincoln D. Stein
> Cold Spring Harbor Laboratory
> 1 Bungtown Road
> Cold Spring Harbor, NY 11724
> (516) 367-8380 (voice)
> (516) 367-8389 (fax)
> FOR URGENT MESSAGES & SCHEDULING, 
> PLEASE CONTACT MY ASSISTANT, 
> SANDRA MICHELSEN, AT michelse at cshl.edu
> 


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