[Bioperl-l] Reading GenBank Genomic File Annotation

Brian Osborne osborne1 at optonline.net
Thu May 18 21:54:01 UTC 2006


Nick,

Have you read the Feature-Annotation HOWTO? This would be a good starting
point...

Brian O.


On 5/18/06 4:49 PM, "Staffa, Nick (NIH/NIEHS) [C]" <staffa at niehs.nih.gov>
wrote:

> Would like a fairly simple way to extract certain information from Genbank
> Genomic File Annotations.
> Namely the six D.melanogaster sequences.
> Specifically to find gene entries and learn the gene name, begin and end and
> CDS.
> Please point me to appropriate modules and documentation.
> 
> 
> Nick Staffa
> Telephone: 919-316-4569  (NIEHS: 6-4569)
> Scientific Computing Support Group
> NIEHS Information Technology Support Services Contract
> (Science Task Monitor: Jack L. Field( field1 at niehs.nih.gov )
> National Institute of Environmental Health Sciences
> National Institutes of Health
> Research Triangle Park, North Carolina
> 
> 
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