[Bioperl-l] parsing blast results : how to get the length of the proteinseq

[Jason Stajich]

hit->length

See the SearchIO HOWTO it tells you all of that.

-jason
On Mar 10, 2006, at 2:40 PM, Hubert Prielinger wrote:

> hi,
> in a blast result file there is written the the length of the entire
> protein, how is it possible to parse it, because $hsp->length is the
> length of the matched part
>
> regards
> Hubert
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--
Jason Stajich
Duke University
http://www.duke.edu/~jes12