[Bioperl-l] newbie tries StandAloneBlast and receives "cant open BLOSUM62"

[Chris Fields]

Sounds good!

I made changes to the wiki install file to show examples of setting up env
variables in Windows to clear up any confusion:

http://www.bioperl.org/wiki/Installing_Bioperl_on_Windows#Setting_environmen
t_variables


Christopher Fields
Postdoctoral Researcher - Switzer Lab
Dept. of Biochemistry
University of Illinois Urbana-Champaign 


> -----Original Message-----
> From: bioperl-l-bounces at lists.open-bio.org [mailto:bioperl-l-
> bounces at lists.open-bio.org] On Behalf Of Harald
> Sent: Thursday, March 02, 2006 8:09 AM
> To: Chris Fields
> Cc: bioperl-l at lists.open-bio.org; 'Torsten Seemann'
> Subject: Re: [Bioperl-l] newbie tries StandAloneBlast and receives "cant
> open BLOSUM62"
> 
> The cause for my problem was that I had no BLASTDIR set. Now that this
> path is on my PATH-environment variable all is fine, although my
> ncbi.ini points to the data-directory in a UNIX-like format.
> 
> Regards,
> Harald
> 
> 
> >Torsten's right.  This is what I have for BLASTDIR:
> >
> >C:\Documents and Settings\Administrator>echo %BLASTDIR%
> >C:\Research\blast
> >
> >Christopher Fields
> >Postdoctoral Researcher - Switzer Lab
> >Dept. of Biochemistry
> >University of Illinois Urbana-Champaign
> >
> >
> 
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l