[Bioperl-l] Bio::AlignIO::metafasta tests
Heikki Lehvaslaiho
heikki at sanbi.ac.za
Tue Jun 6 07:40:06 UTC 2006
Chris,
I am mystified. I'll try to get the massive 'return undef' change done first
and the have an other look.
-Heikki
On Friday 02 June 2006 21:13, Chris Fields wrote:
> Heikki,
>
> I uncovered a weird bug concerning Bio::AlignIO::metafasta which popped up
> when running AlignIO.t (I was fixing bug 2000):
>
> http://bugzilla.open-bio.org/show_bug.cgi?id=2016
>
> Not sure what's going on there but using read_aln and write_aln seem to
> work normally. It may have something to do with Bio::SimpleAlign but I'm
> not absolutely sure.
>
> Any ideas what may be going on here?
>
> Christopher Fields
> Postdoctoral Researcher - Switzer Lab
> Dept. of Biochemistry
> University of Illinois Urbana-Champaign
>
>
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_/ _/
_/ _/ _/ Heikki Lehvaslaiho heikki at_sanbi _ac _za
_/_/_/_/_/ Associate Professor skype: heikki_lehvaslaiho
_/ _/ _/ SANBI, South African National Bioinformatics Institute
_/ _/ _/ University of Western Cape, South Africa
_/ Phone: +27 21 959 2096 FAX: +27 21 959 2512
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