[Bioperl-l] bioperl object for GO annotation entries?

[Hilmar Lapp]

We don't parse this file (yet). You could write a parser but then you'd 
also want an indexed database represented by some Bio::DB::* instance 
to resolve the sequence record being referenced.

	-hilmar

On Sep 21, 2005, at 2:42 AM, Albert Vilella wrote:

> Dears,
>
> I would like to know if there is an object in Bioperl to contain the
> fields of GO annotation files:
>
> http://www.geneontology.org/GO.annotation.shtml#fields
>
> Or if this fields are meant to be accessed by Bioperl in any way.
>
> Apologies for my ignorance about this topic,
>
> Thanks in advance,
>
> Bests,
>
>     Albert.
>
>
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-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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