[Bioperl-l] [Bioperl -l] Setting Sequence with nonstandard
characters
Iain Wallace
iain.m.wallace at gmail.com
Tue Sep 20 05:28:19 EDT 2005
Hi,
I wonder if anyone could tell me how to set a sequence with
non-standard characters?
I would like to use the string "???AGCTAGTAC" as a sequence string but
when I set it using
$string = "???AGCTAGTAC";
$seq->seq($string);
I get an exception complaining that the sequence doesn't look healthy.
Is there any way I can turn this check of?
Thanks for any help
Iain
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