[Bioperl-l] producing an organism report from BLAST results?

[Jason Stajich]

Tim  -
Will have to consult other members of the list for StandAloneBlast  
and RemoteBlast help, sorry.

-jason
On Nov 21, 2005, at 5:04 PM, Tim Reid wrote:

> i am using NCBI-BLAST by way of Bio::Tools::Run::RemoteBlast.
>
> i tried adding "-I" =>'T' to the @params used to instantiate my  
> RemoteBlast object, but this did not work.
>
> further help appreciated. can you tell me if StandAloneBlast  
> supports the use of NCBI's netblast? i couldn't tell, but if it  
> does that could be another option.
>
> thanks.
>
>

--
Jason Stajich
Duke University
http://www.duke.edu/~jes12