[Bioperl-l] Bioperl-ext (staden::read) install issues
Chris Papadopoulos
papadop at uga.edu
Fri Nov 4 10:08:52 EST 2005
Hi all,
Running bioperl 1.4 on Mac OS 10.4.2.
Installed the Inline modules, copied .h files to /usr/local/include/
io_lib/
Here's the directory, probably has more than it needs (just got
frustrated and dumped 'em all):
papadop:/usr/local/include/io_lib>ls
Read.h compression.h open_trace_file.h tar_format.h
abi.h config.h os.h traceType.h
acconfig.h error.h plain.h translate.h
alf.h expFileIO.h scf.h xalloc.h
array.h fpoint.h scf_extras.h ztr.h
calc_crc.h mach-io.h seqIOABI.h
compress.h misc.h seqIOCTF.h
For brevity's sake, please refer to the message dated Thu Apr 1
13:02:01 EST 2004 from Barry Moore entitled:
[Bioperl-l] Trouble installing bioperl-ext / Bio::SeqIO::staden::read
I'm having the exact same problem and my make output is virtually
identical. I specified the location of IOLIB_LIB and IOLIB_INC for
Makefile.PL as suggested.
I would appreciate anyone's help here.
Thanks,
Chris Papadopoulos
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