[Bioperl-l] Amino acid frequency counter

[Jason Stajich]

Bio::AlignIO for reading in sequence alignments produces 
Bio::SimpleAlign objects.

On Jan 21, 2005, at 12:14 PM, Goel, Manisha wrote:

> Hi All,
> I have recently started using Bio-perl to analyse and manipulate my
> protein sequence alignments.
> I need to calculate aminoacid frequencies at each column of the
> alignment. Which module could be of help ?
> Thanks for guiding,
> -Manisha
>
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--
Jason Stajich
jason.stajich at duke.edu
http://www.duke.edu/~jes12/