[Bioperl-l] NCBI BLink

Rob Edwards rob at salmonella.org
Wed Jan 19 00:05:01 EST 2005


I wrote that when I needed some BLink functionality, and the module did  
exactly what I wanted. However, I never really rolled it into bioperl  
proper, never committed it, and never pursued it. If you'd like to add  
more functionality go ahead.

Rob


On Jan 18, 2005, at 11:49 AM, Paulo Almeida wrote:

> Is anyone working on a parser for BLink? I found a module by Rob  
> Edwards
> (http://www.salmonella.org/bioperl/Blink.pm), but I wanted to have the
> Best Hits page, so I added an extra parameter (-besthits) to that  
> module,
> which you set to '1' to have the desired behavior.
>
> I'm attaching the .diff file and the module itself.
>
> --
> Paulo Almeida
> Instituto Gulbenkian de Ciencia
> Apartado 14, 2781-901, Oeiras, PORTUGAL
> tel  +351 21 446 46 35
> fax  +351 21 440 79 70
> http:// 
> www.igc.gulbenkian.pt<BlinkNew.pm><blink.diff>_________________________ 
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