[Bioperl-l] bioperl

[Barry Moore]

Robin-

Have you checked out the BioJava project?  http://www.biojava.org/.  
Yes, the RichSeq objects use by bioperl contain the information from the 
GenBank features table.  Bio::SeqIO understands a variety of XML formats.

Barry

Robin XML wrote:

>Dear Sir,
>I am a beginner in bioinformatics. I am being excited
>by your fantastic biopel functions. But some questions
>confuse me:
>1.Is it possible to call bioperl functions by Java
>under Windows? because I need a GUI and need Java to
>handle XML template modification.
>2. Is it correct that with Bio::DB::GenBank() and
>Bio::SeqIO, I can get full GanBank data in XML format?
>Is it means include the features part?
>
>
>Thank you!!!!!!
>
>Best regards,
>Robin
>
>
>
>	
>		
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-- 
Barry Moore
Dept. of Human Genetics
University of Utah
Salt Lake City, UT