[Bioperl-l] Bio::Biblio

[Marc Logghe]

Happy Newyear to you all !

Jan, there is nothing to worry about concerning your code.
It is just that there are some electricity problems at the EBI which caused the soap server to be down for while.
So, most of the soap services are currently unavailable.
The original message you find on the Taverna mailing list:
http://sourceforge.net/mailarchive/forum.php?thread_id=6274312&forum_id=35847

So, I guess there is nothing that you can do besides waiting ;-)

HTH,
Marc


-----Oorspronkelijk bericht-----
Van: bioperl-l-bounces at portal.open-bio.org namens Jan Teune
Verzonden: wo 5-1-2005 13:10
Aan: bioperl-l at bioperl.org
Onderwerp: [Bioperl-l] Bio::Biblio
 
Hello @ all,
I'm writing a small script to fetch PubMed-Articles. Since two weeks 
before Christmas, I have a problem to fetch Articles. Below is some Code 
and the Error-Message:

#!/usr/bin/perl -w
use Bio::Biblio;
my $pmid = "15542139";
my $biblio = new Bio::Biblio(
                 -access    => 'soap',
                 -location    => 'http://industry.ebi.ac.uk/soap/openBQS',
                 -destroy_on_exit => '0',
                 );
my $citation = $biblio->get_by_id($pmid);
print $citation;
The Error-Message:
------------- EXCEPTION: Bio::Root::Exception -------------
MSG: --- TRANSPORT ERROR ---
502 Proxy Error
STACK: Error::throw
STACK: Bio::Root::Root::throw /usr/share/perl5/Bio/Root/Root.pm:328
STACK: try{} block /usr/share/perl5/Bio/DB/Biblio/soap.pm:119
STACK: SOAP::Lite::call /usr/share/perl5/SOAP/Lite.pm:3006
STACK: try{} block /usr/share/perl5/SOAP/Lite.pm:2950
STACK: Bio::DB::Biblio::soap::get_by_id 
/usr/share/perl5/Bio/DB/Biblio/soap.pm:368
STACK: ./bibliotest.pl:9
-----------------------------------------------------------

I'm happy for any kind of help,

Jan  :-)

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