[Bioperl-l] Bio::DB::GFF::Adaptor::berkeleydb

[Lincoln Stein]

> >   my $subseg   = $segment->subseq(5000..6000);

Actually this is just a typo. The .. should be a comma. Fixing.

Lincoln

> >   my @features = $subseg->features('gene');
> >
> >
> > Is there a reason to introduce a new subseq API since we already
> > have $seq->subseq($start,$end) for Bio::PrimarySeqI?  I didn't
> > check to see, but I assume this is a convention you are using
> > throughout Bio::DB::GFF? Hopefully start,end will work and I assume
> > your usual start => end works too.
> >
> > Thanks,
> > -jason
> > --
> > Jason Stajich
> > Duke University
> > http://www.duke.edu/~jes12
> >
> >
> > _______________________________________________
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> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
>
> --
> Jason Stajich
> Duke University
> http://www.duke.edu/~jes12

-- 
Lincoln D. Stein
Cold Spring Harbor Laboratory
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