[Bioperl-l] dividing seqboot outfiles

[Jason Stajich]

How about Bio::AlignIO?

my $aln = Bio::AlignIO (-format => 'phylip);
On Aug 4, 2005, at 11:29 AM, matthieu wrote:

> Hello,
> I'm trying to divide seqboot outfiles containing 100  
> multialignments in , for example, 10 files of 10 multialignments. I  
> did'nt find any parser for this.
> I'm thinking about identifying the first charaters of the seqboot  
> outfiles (ex :" 3   639 " in my example) to recognize each  
> multialignment "blocks" but I didn't manage to do this...
> In join my frist code and an example of seqboot outfile.
> Thanks
>
>
> Matthieu
>
>
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--
Jason Stajich
Duke University
http://www.duke.edu/~jes12